CDS

Accession Number TCMCG057C06709
gbkey CDS
Protein Id XP_018470419.1
Location join(25206860..25206887,25206986..25207146,25207259..25207348,25207440..25207601,25207851..25207912,25208047..25208137,25208355..25208518,25208687..25208900,25209012..25209557,25209647..25209859,25210005..25210395,25210492..25210582,25210658..25210742,25210865..25211051,25211300..25211598,25211777..25211867,25211967..25212145)
Gene LOC108842103
GeneID 108842103
Organism Raphanus sativus

Protein

Length 1017aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018614917.1
Definition PREDICTED: trafficking protein particle complex II-specific subunit 130 homolog isoform X3 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category S
Description Trafficking protein particle complex subunit 10, TRAPPC10
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K20307        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000278        [VIEW IN EMBL-EBI]
GO:0000281        [VIEW IN EMBL-EBI]
GO:0000910        [VIEW IN EMBL-EBI]
GO:0000911        [VIEW IN EMBL-EBI]
GO:0000919        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005768        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005802        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006891        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0016197        [VIEW IN EMBL-EBI]
GO:0016482        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030008        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0032506        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034498        [VIEW IN EMBL-EBI]
GO:0042147        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044431        [VIEW IN EMBL-EBI]
GO:0044433        [VIEW IN EMBL-EBI]
GO:0044440        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048193        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051301        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0061640        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098791        [VIEW IN EMBL-EBI]
GO:0099023        [VIEW IN EMBL-EBI]
GO:1902410        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]
GO:1990071        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTTAATATATAGCGGGAAGATAAACTTTAATATGCCTGGGAAAAAGAGAGATTTTGGAGGATTCGACAGTGAAGATGACCAAGCTGCGCTGCTGAAACCAGGAAGCAAACCACTGACACAGATGGTTCATGATGATTCTTTTAGAGAGTTTGATTTCAGACAGTATCTCTTTGCCTGTCAGTCTCGGCTGTTGTTCAAGTTGAATCGTCCTTTTGAAGTTTCATCCAGGGGATATTCTTTTGTTATCAGCTTTGCAAAGGCCTTGACCTTCCATGAGAGTGTACTTCCCTTCTGTTTGCGGGAAGTTTGGGTGTTTACTGCATGTTTAGCGTTGCTCGATGCAACTGCTTCTCATCACAACGATGGCGTTGTGGCACCTGATATTGAAAAGGAGTTCTACCGTCTTCAGGGTGATCTCTATTCACTGTCACGGCTTAAGTTCATGAGACTTGGATATCTGATAGGATATGGAACAGACATAGAAAAAAGTCCACTGAACAGTGCTTGTCTCAGCATGCTGCCGTGGCCAAAACCAGCAGTCTGGCCATCTCTTCCACCAGATGCTTCCTCTGAGGTGCTTGAAAAAGAAAAGACTATTCTACAAGAAACTTCAAGGACCAAGCACTTTGGGATCCAGCGGAAACCTTTACCCCTTGAACCATCTGTCCTTCTGCGTGTGGCTAACAGAAGAAGGGCTTCTCTTTCTACTGGAAATATTTCTGAAATATTTGATGGCCGCCCAGGCTTTACTGAAGGATCAGGTTTAGAAGCGTCTCCAAGAACCCCTTCATCACTTAAAGTACAAGCAACTCCAATGTCGAGAACAAATTCCTCACCCGGAAATTTTGAGAGTCCGCTAGATAGGCCTATGAGGCTTGCTGAAATTTTTGTTGCAGCTGAACACGCTCTACGGCTTACCATTTCAGATCACGATTTGTTGAAGACATTGTCATCTGTTCAGGATTTCGAGCATAAATATCTTAATCTAACCAAAGGTGCTGCCGAAAATTATCACCGTTCTTGGTGGAAGAGACATGGAGTCGTTCTTGATGGTGAAATTGCAGCGGTCTGCTTCAAGCACGGGAAATATGATTTGGCTGCAAACTCTTATGAAAAAGTTTGTGCCCTTTACGCGGGTGAAAGATGGCAAGATTTGCTAGCAGAAGTCTTGCCCAATTTGGCTGAGTGTCAAAAGATTCTTAATGATCAAGCTGGGTACATGTCATCTTGTGTTAGGCTACTTTCGTTGGATAAGAGCTTATTCTCGTCCAAGGAGCGACAAGCTTTTCAGTCCGAGGTTGTCAATATTGCACACAGTGAAATGAAGAACCCAGTTCCCTTAGATGTGTCATCATTGATAACATTTTCTGGAAATACTGGTCCTCCTCTTCAGTTGAGTGATGGAGACCCTGGGAATCTATCTGTTACTGTGTGGAGTGGCTTTCCTGATGATATCACCCTTGATTCACTTAGTCTTACCTTGGTAGCCACTAACAACACTGACGAAGGCGGCCAGGCTTTGAAGAGTTCAGCTGCAACTGTACTAAAGCCCGGAAAGAATACTATCACATTTGATTTGCCGCCACAAAAACCCGGTTCCTATGTTTTGGGAGTCGTCACTGGCCAGATTGGTCGCTTGAGATTCAGGTCTCACAGCTTTTCAAAGGGTGGTCCTGGAGAAAGTGATGATTTTATGAGTTATGAAAAGCCAACCAGACCTATCTTGAAGGTGTCCAAACCAAGAGCTCTGGTTGATCTTTCTTCAGCTGTATCTTCTGCGCTGCTTATAAATGAAGCCCAGTGGATTGGTGTCATTGTGCGTCCTATTAATTACTCACTGAAAGGCGCCATCTTGCACATTGATACTGGTCCAGGGCTAAAGATTGAAGACTCATACGGCATCGAGATGGAGAGATACGTGGAAACAGATTGCGATGCTGGTGCAACAAAAGCTGAAGCTTCTGAAGAAGATAGCCCTGTCTCTCCAAAACGTGATTCAGAGGTCCTTAATCTCTGCGACGGGAAAATAGTTTTCTCAGAATGGGCAAGCAATGTGAGTTCTATTCTCTGGGTCCCTGTTCGTGCATTGAGTGAGAAGCTTGCTAGAGGTTCATCTTCAGTCACTCCGCTGAAACAAGATATTTTAGAGGGAATGAGAACTGTGGCTCTGAAACTTGAATTTGGGGTGCATCATAACCAGATATTTGAGAGAACGATAGCTGCACATTTTACCGACCCTTTTGACGTGACTACAAGGGTGGCAAACAAATGCAATGATGGCACGTTGGTCTTGCAGGTTATGCTACACTCCCTTGTCAAGGCCAACTTGATAGTTCTTGATGCTTGGCTTGATCTTCAAGATGGATTTGTACATGGAAAAAGTGATGGAAGACCAACTGCAACGTTCTTTCCCCTTGTTGTGTCACCGGGATCTAGAGCAGCAGTCGTGTTCAGTATATCCATAGAGAAGACAATTCCATCAGGAAAAGATTTGCAGGTACCAGAGAGCATTCTGAATATCAAATATGAAATCCATGGTGATAGAGCTGCTGGAGCACACAAACCGGTGGATGCAGATCACTCTGGAACTGATGCTGAAAGGAGAGATTTGGTGTTCAAGAGTGCTATTGTTTTGCAGCGTCCAGTGCTTGATCCTTGTCTGACAGTTGGATTCCTCCCACTTCCTTCCGATGGTCTTAGGGTCGGGAAACTTATTACCATGCAGTGGAGAGTCGAAAGGCTGAAAGAGCTCAAGGGAAGTGAAGCCATAGAACAGCAACAAGATGAGGTATTATACGAAGTCAATGCAAATTCGGAGAACTGGATGATTGCGGGTAGGAAGAGAGGTTATGTCTCTCTCTCAGAGGAGCAAGGTTCAAGAGTGGTAATATCGATACTGTGTGTTCCATTAGTTGCGGGTTATGTCCGTCCTCCTCAGCTAGGTTTGCCAAACGTGGAAGAAGCAAATGTAAGCAGCAATCCACCGGGTCCTCACTTAGTGTGCGTTTTGCCTCCACTTCTCAGTTCTTCCTTTTGCGTCCCTGTCAAGTAG
Protein:  
MLIYSGKINFNMPGKKRDFGGFDSEDDQAALLKPGSKPLTQMVHDDSFREFDFRQYLFACQSRLLFKLNRPFEVSSRGYSFVISFAKALTFHESVLPFCLREVWVFTACLALLDATASHHNDGVVAPDIEKEFYRLQGDLYSLSRLKFMRLGYLIGYGTDIEKSPLNSACLSMLPWPKPAVWPSLPPDASSEVLEKEKTILQETSRTKHFGIQRKPLPLEPSVLLRVANRRRASLSTGNISEIFDGRPGFTEGSGLEASPRTPSSLKVQATPMSRTNSSPGNFESPLDRPMRLAEIFVAAEHALRLTISDHDLLKTLSSVQDFEHKYLNLTKGAAENYHRSWWKRHGVVLDGEIAAVCFKHGKYDLAANSYEKVCALYAGERWQDLLAEVLPNLAECQKILNDQAGYMSSCVRLLSLDKSLFSSKERQAFQSEVVNIAHSEMKNPVPLDVSSLITFSGNTGPPLQLSDGDPGNLSVTVWSGFPDDITLDSLSLTLVATNNTDEGGQALKSSAATVLKPGKNTITFDLPPQKPGSYVLGVVTGQIGRLRFRSHSFSKGGPGESDDFMSYEKPTRPILKVSKPRALVDLSSAVSSALLINEAQWIGVIVRPINYSLKGAILHIDTGPGLKIEDSYGIEMERYVETDCDAGATKAEASEEDSPVSPKRDSEVLNLCDGKIVFSEWASNVSSILWVPVRALSEKLARGSSSVTPLKQDILEGMRTVALKLEFGVHHNQIFERTIAAHFTDPFDVTTRVANKCNDGTLVLQVMLHSLVKANLIVLDAWLDLQDGFVHGKSDGRPTATFFPLVVSPGSRAAVVFSISIEKTIPSGKDLQVPESILNIKYEIHGDRAAGAHKPVDADHSGTDAERRDLVFKSAIVLQRPVLDPCLTVGFLPLPSDGLRVGKLITMQWRVERLKELKGSEAIEQQQDEVLYEVNANSENWMIAGRKRGYVSLSEEQGSRVVISILCVPLVAGYVRPPQLGLPNVEEANVSSNPPGPHLVCVLPPLLSSSFCVPVK